Coerce flowFrames or flowSets into tibbles.

Usage

as_tof_tbl(
  flow_data,
  .name_method = c("tidyFlowCore", "featureNames", "colnames"),
  sep = "|",
  ...
)

Arguments

flow_data: A flowFrame or flowSet
.name_method: A string indicating how tidyFlowCore should extract column names from `flow_data`. Available options are "tidyFlowCore" (the default), which uses tidyFlowCore's internal heuristic to name columns; "featureNames", which uses featureNames to name the columns; and "colnames", which uses colnames to name the columns. Note that, in most cases, "featureNames" and "colnames" will give identical results.
sep: A string indicating which symbol should be used to separate antigen names and channel names in the columns of the output tof_tbl when .name_method = 'tidyFlowCore'.
...: Optional method-specific arguments.

Value

A cytometry-specialized tibble called a `tof_tbl`.

Examples


input_file <- system.file("extdata", "0877408774.B08", package="flowCore")

input_flowframe <- flowCore::read.FCS(input_file)

tof_tibble <- as_tof_tbl(input_flowframe)